To investigate the migration trajectory of the center of gravity of rural settlements in China from 2000 to 2018 and its impact on the intensive utilization of rural settlements and the spatial pattern of cultivated land occupation, the methods of center of gravity model and standard deviation ellipse model were employed. The results showed that from 2000 to 2018, the center of gravity of Chinese rural settlements migrated 17545.67 meters to the northwest, including 8843.191 meters to the west and 15154.162 meters to the north. During the four periods of 2000–2005, 2005–2010, 2010–2015, and 2015–2018, the center of gravity of rural settlements in China followed a trajectory of “southwest-southeast-northwest-northwest” with migration speeds of 894.326, 854.994, 1368.894 and 8108.936 m/a, respectively. Before 2010, the center of gravity primarily migrated southward at a relative slow pace, while after 2010, it migrated rapidly towards the northwest. From 2000 to 2018, the spatial distribution range of rural settlements in China showed a trend of initial contraction followed by expansion. Specifically, the distribution range decreased from 2000 to 2015 and expanded after 2015. Rural settlements exhibited a clustering pattern in the main trend direction (north-south) and a dispersing pattern in the east-west direction. The study shows that the utilization of rural settlements in northern China is more extensive, especially in northern, northeastern and eastern China, where the per capita area and growth rate of rural settlements are faster, the degree of intensive utilization is lower. The net occupation of arable land by rural settlements is the highest in the country, making it the region with the most serious occupation of arable land. The central-southern and southwestern regions are more intensive. The results of the study can provide a scientific basis for understanding the dynamics of the evolution of rural settlements and guiding the adjustment of the spatial layout of rural settlements.